2017-12-29 12:07:512025-05-11 16:22:49

locus

BSU13090

BSU_13090

geneLength

336

339

outlinks

bsu

BSU13090

BSU_13090

Gene

Coordinates

1,376,517 → 1,376,855

1,376,517 1,376,855

The protein

Protein family

paired small multidrug resistance protein family ([SW|PSMR family]) [Pubmed|17942072]

[SW|drug/metabolite transporter (DMT) superfamily] (according to UniProt)

[SW|Small multidrug resistance (SMR) (TC 2.A.7.1) family] (according to UniProt)

Biological materials

Mutant

MGNA-A747 (ykkC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/747 NBRP B. subtilis, Japan]

BKE13090 (Δ[[gene|ykkC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAGTCATTCCTTTC, downstream forward: _UP4_GAGGAAAAAGGAGGCGAGGC

BKK13090 (Δ[[gene|ykkC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAGTCATTCCTTTC, downstream forward: _UP4_GAGGAAAAAGGAGGCGAGGC

MGNA-A747 (ykkC::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/747 NBRP B. subtilis, Japan]

BKE13090 ([[gene|ykkC]]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE13090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAGTCATTCCTTTC, downstream forward: _UP4_GAGGAAAAAGGAGGCGAGGC

BKK13090 ([[gene|ykkC]]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK13090 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAGTCATTCCTTTC, downstream forward: _UP4_GAGGAAAAAGGAGGCGAGGC

References

Original publications

15096624, 10735877, 21317561, 27120414, 27989440

15096624, 10735877, 21317561, 27120414, 27989440, 28096518

The protein

Paralogous protein(s)

[[this]]

The protein

Structure

[PDB|5U3G] (the [SW|riboswitch] from Dickeya dadantii, bound to guanidinium) [pubmed|28096518]